arrayloaders.io

IO.

Lightning data modules.

ClassificationDataModule(adata_train, ...[, ...])

A LightningDataModule for classification tasks using arrayloaders.io.DaskDataset.

Torch data loaders.

DaskDataset(adata, label_column[, n_chunks, ...])	Dask-based IterableDataset for loading AnnData objects in chunks.
read_lazy_store(path[, obs_columns, ...])	Reads a Zarr store containing multiple shards into a single AnnData object.
read_lazy(path[, obs_columns, read_obs_lazy])	Reads an individual shard of a Zarr store into an AnnData object.

Array store creation.

create_store_from_h5ads(adata_paths, output_path)

Create a Zarr store from multiple h5ad files.